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**************Genomics & Informatics Lab (GIL) ***************** **************Your Trusted Partner in Advanced Bioinformatics & AI-Driven Multi-Omics****** I lead a distinguished team at Genomics & Informatics Lab (GIL), specializing in Biotechnology, Bioinformatics, Computational Biology, and AI-powered Multi-Omics. At GIL, we offer a comprehensive suite of cutting-edge services tailored to meet the evolving demands of genomics, transcriptomics, proteomics, metagenomics, pharmacogenomics, and precision medicine. Our Expertise: AI-Powered Bioinformatics & Multi-Omics Data Analysis 🔬 1. Bioinformatics & Genomics: AI/ML-powered Next-Generation Sequencing (NGS) data analysis Comparative & Population Genomics for evolutionary insights Genetic variant detection & annotation Functional Genomics (Gene Ontology, KEGG Pathway analysis) Phylogenetics & Evolutionary Genomics miRNA structure prediction & target analysis 🧬 2. AI-Driven Transcriptomics & Epigenomics: RNA-Seq & Single-Cell Transcriptomics Differential Expression & Alternative Splicing Analysis Epigenomics: DNA Methylation & Histone Modification Analysis 💊 3. Computational Pharmacogenomics & Precision Medicine: AI-assisted drug-gene interaction prediction Pharmacogenomic modeling for personalized medicine Toxicogenomics & Drug Response Prediction 🦠 4. Metagenomics & Microbiome Data Science: Whole-genome & 16S rRNA sequencing-based microbiome analysis Microbiome-host interaction modeling AI-powered taxonomic & functional profiling ⚛ 5. AI in Structural & Systems Biology: Protein-Protein Interaction Analysis & Docking Molecular Dynamics (MD) & Simulation Studies AI-driven protein structure prediction (AlphaFold, Rosetta, etc.) 🤖 6. AI & Machine Learning in Multi-Omics Integration: Deep learning for biomarker discovery Multi-omics data integration (Genomics, Proteomics, Metabolomics, Epigenomics) Network-based systems biology approaches 🚀 State-of-the-Art Computing Infrastructure GIL is equipped with high-performance computing (HPC) clusters, multi-core processing, and cloud-based analytics, ensuring scalable, fast, and accurate bioinformatics solutions. 💡 Why Choose GIL? ✅ Expert Team: Decades of experience in computational biology & AI ✅ Cutting-Edge Technologies: AI, ML, and HPC-powered analytics ✅ Proven Track Record: Successful projects in academia & industry ✅ Custom Solutions: Tailored pipelines for diverse research needs Let GIL be your trusted partner in advancing your research! Contact us today to explore how we can support your next breakthrough in computational biology and AI-driven bioinformatics. 🔍💻🧬

As a Microbiologist and a researcher having 1.5+ years experience of working in a Bioinformatics Lab. I can offer you: 🔬 Molecular Docking Analysis AutoDock Vina, PyRx, Chimera, MGLTools, Discovery Studio Visualizer, pymol, CBdock2, Swissdock 🧬 Subtractive and Comparative Genomics Software: BLAST+, OrthoFinder, Roary, Mauve, RAST, EggNOG, KEGG, PATRIC, DEG, EDGAR, venny bioinfo 🧪 Enzyme Engineering Modeller, SwissModel, AlphaFold, PyMOL, ChimeraX, Discovery Studio, I-Mutant, CASTp 📊 Data Science & GEO, Microarray Data Analysis R (limma, GEOquery, clusterProfiler), Bioconductor, GEO2R, Python (pandas, matplotlib) 🎨 Molecular Visualization PyMOL, Chimera, ChimeraX, Discovery Studio Visualizer 💻 Virtual Screening AutoDock Vina, PyRx, SwissADME, Open Babel, ChemSketch, ZINC15, PubChem, Molview 📊 Linux-based Bioinformatic Services BASH scripting, Conda, FastQC, SAMtools, Entrez Direct (EDirect), MAFFT, TrimAl 📊Scientific and Biological Illustration Adobe Illustrator Canva Figma PowerPoint 📚 Literature Review Tools: Zotero, EndNote, Research Rabbit, Google Scholar, PubMed, Connected Papers ✍️ Medical Writing Grammarly, Typeset, PubMed, SciSpace, AI content validation tools (ChatGPT, Perplexity AI) 📝 Research Write-up Tools: MS Word, LaTeX, Zotero, EndNote 📚 Review Article Write-up Tools: PubMed, Google Scholar, ResearchGate, Zotero, Grammarly, Typeset, EndNote 📊 Interactive Excel Dashboards Software: Microsoft Excel (Power Query, Power Pivot, XLOOKUP, Pivot Tables), and, 📊SDS Desitometry Analysis ImageJ Excel Adobe Illustrator I am also a passionate online tutor with a conceptual teaching style. I can create impactful presentations, and have video editing and youtube experience. I am also skilled in Urdu-English translation and proficient with Endnote and Zotero for research and referencing. I can make Interactive excel Dashboards also on the data you provide me. So, feel free to contact me and I will find and discuss solutions for your problems. Thanks!

Dear Upworkers, Allow me to provide a concise overview of the services I offer in Biochemistry, General Chemistry, Biology, and as a Dissertation & Thesis Coach: I specialize in delivering expert guidance and support in the fields of Biochemistry, General Chemistry, and Biology. I could provide you with an expert advice on these fields. I am familiar with work in PowerPoint, Chem Draw, Origin, Fiji/ImageJ and Adobe Illustrator programs. As a seasoned Dissertation & Thesis Coach, I also assist individuals in achieving academic success. ◼Projects and Accomplishments: Over the years, I have accomplished significant milestones. Let the clients' testimonials speak first! ▪️Laboratory preparation (Biochemist required) ⭐⭐⭐⭐⭐ 5.00 "Tehreem Fatima has performed excellently and delivered in accordance with our requests and expectations. Her submissions were clear, and she has adhered to timelines. We would surely use her expert services again for any future work and would, without hesitation, recommend her to others, seeking a similar service." ▪️Genomics writer ⭐⭐⭐⭐⭐ 5.00 "She is very good to communicate, and her work is excellent." ▪️Auto dock tutorial ⭐⭐⭐⭐⭐ 5.00 5.00 Jul 2, 2022 - Jul 8, 2022 "Good job Tehreem amazing tutorial informative" ▪️Biochemistry and Biotechnology expert needed ⭐⭐⭐⭐⭐ 5.00 The proficiency in the raw molecular biology, calculations and everything else was truly outstanding. Everything is really great working with her." ▪️Bio energy and bio refinery technology expert needed ⭐⭐⭐⭐⭐ 5.00 In the field of bioenergy and biorefinery, she was really competent. The knowledge calculations and help with the intricate details of the syllabus were truly outstanding. I’d work with her again surely." 📌Description of Services: My expertise spans across multiple disciplines, including molecular biology, genetics, microbiology, bioinformatics and biochemistry, developing research questions, writing introductions and literature reviews, employing methodologies, analyzing data, presenting results, and forming conclusions and recommendations. Additionally, I have excellent technical writing skills and can communicate complex scientific concepts in a clear and concise manner. I Can provide assistance in ◼ Dissertation and Thesis ◼ Literature Reviews ◼Manuscript/Research Paper Writing ◼ Scientific writing ◼ Referencing Management ◼Data analysis ◼ Medical Research ◼Paraphrasing and Proofreading ◼Medical Writing 🔺In all disciplines of Chemistry 🔺Biochemistry-related any issue BIO INFORMATICS Moleculer Docking, using auto-dock vina. pymol, swiss Pdb viewer 🔺Bioinformatics I believe in fair work and quality results. I hope to provide my clients with quality work in reasonable charges. ⭐One of the best perks of hiring me is you can get unlimited number of revisions. Your success is my victory! I can provide you articles that have: ✔ High readability scoring. ✔ Following SEO guidelines. ✔ Plagiarism Free. ✔ Correct language and grammar. ◼Why should you hire me??? Because I have spent the last 8 years of my life pursuing different roles in life science research, writing, and planning and earned a Ph.D. in, biochemistry Genetics. And this experience will add incremental value to your project. ◼For inquiries or to discuss how I can assist you in your academic pursuits, please don't hesitate to contact me.

From raw genomics data (FASTQ, RNA-seq, scRNA-seq, NGS, WGS, WES) to publication-ready genomics analysis, differential expression, pathway analysis, variant interpretation, biomarker discovery, SNPs analysis and reproducible genomics pipelines delivered fast, accurately, and ready for real-world research and clinical genomics applications. As a Genomics & Bioinformatics Expert, I help researchers, labs, biotech teams, and genomics-focused organizations transform complex genomics and sequencing data into differential expression, pathway analysis, variant calling insights, genomic interpretation, population genomics analysis, biomarker discovery, dashboards for biological data visualization, and end-to-end genomics workflows for research, diagnostics, and precision medicine applications. As a Genomics & bioinformatics programmer, computational genomics specialist, and machine learning engineer, I build scalable genomics pipelines and sequencing analysis workflows for RNA-seq, scRNA-seq, NGS, WGS, WES, GWAS, transcriptomics, and multi-omics data using Python, R, Bash, Nextflow, and Snakemake. With 5+ years of experience, I develop reproducible genomics workflows with Docker-based deployment and scalable computational pipelines for genomics research, biomedical data analysis, and large-scale sequencing projects. In Genomics, I specialize in RNA-seq, scRNA-seq, NGS, WGS, WES, transcriptomics, population genomics, GWAS, differential expression, pathway analysis, and multi-omics analysis, transforming raw sequencing data into actionable biological insights for publications, clinical research, and genomics-driven product development. ------------------------------------------------------------------------------------------------------------------ MY EXPERTISE INCLUDE ------------------------------------------------------------------------------------------------------------------ * End-to-end bioinformatics pipelines, data science pipelines, and machine learning pipelines with Python, R, Bash, Nextflow, and Snakemake * Docker-based deployment, containerization, and production-ready workflow development * RNA-seq and scRNA-seq analysis: QC, alignment, normalization, differential expression (DESeq2, edgeR, Seurat) * NGS data analysis: WGS/WES variant calling, annotation, and genomic interpretation (GATK, Samtools, Bedtools) * Genomic / Gene Expression Anlaysis * Primer and probe design for PCR/qPCR assays, including in silico validation, Tm and GC optimization, hairpin/dimer analysis, and BLAST specificity checks * Machine learning and AI on omics data: predictive modeling, classification, clustering, biomarker discovery * Multi-omics integration: transcriptomics, proteomics, metabolomics * Population genetics, GWAS, and statistical genetics analysis * Structural bioinformatics, protein-ligand docking, and pathway analysis * Biostatistics: f-statistics, qpAdm, qpWave, phylogenetics ------------------------------------------------------------------------------------------------------------------ TOOLS AND TECHNOLOGIES ------------------------------------------------------------------------------------------------------------------ Python, R, scikit-learn, TensorFlow, PyTorch, LLM frameworks, vector databases, Nextflow, Snakemake, Docker, GATK, Seurat, Samtools, Bedtools, IGV, Cytoscape, PyMOL, Primer3, IDT OligoAnalyzer, NCBI BLAST ------------------------------------------------------------------------------------------------------------------ I help clients transform complex biological and biomedical data into reproducible, scalable, and actionable result, combining bioinformatics, data science, and AI/ML to accelerate research, support publications, and deliver deployable solutions. If your project involves RNA-seq, NGS, scRNA-seq, multi-omics, machine learning on omics data, I can deliver end-to-end solutions from data processing to deployable outputs. Let’s discuss your project.

I am an experienced researcher with a PhD in Biophysics (biomedicine and wound-healing) and over 10 years of academic experience in biomedical writing and publishing. With extensive academic experience in research, writing, and publishing, I integrate scientific expertise with a commitment to clarity and precision. My core expertise covers following: 🔬 Biomedical Formulations: Hydrogels, biomaterials, ointments, creams, transdermal patches ⚗️ Material synthesis and characterization: XRD, SEM, FTIR, UV-Vis spectroscopy, physicochemical testing 🧪 Cellular & Preclinical Assays: MTT/Live-Dead, cytotoxicity, biocompatibility evaluation, cell culture, PCR, and molecular biology techniques. 📑 Scientific writing and publishing 🖼️ Figures and visualization 📊 Data & Statistics: OriginPro, GraphPad Prism, SPSS, advanced statistical testing My services include: ✍️ Research and Experimental Design Consulting: Hydrogels, polymers, in vitro and in vivo experiments, drug discovery, nano-formulations, and materials synthesis. 📰 Scientific writing and publishing: Research/review articles, thesis/dissertations, lab reports, and referencing 🔍 Proofreading, formatting, referencing, and citation management (EndNote, Mendeley, Zotero). 🖼️ Scientific Figure & Illustration: Professional scientific figures, PowerPoint presentations, graphical abstracts, and illustrations using multiple software. 📝 Blog posts and SEO-targeted content tailored for academic, medical, and scientific audiences 🧪 Laboratory facility available for small-scale biomedical research My background in scientific research and dedication to professional writing ensure the delivery of accurate, reliable, and publication-standard work. I look forward to collaborating with you and contributing to the success of your project. Thank you.

As a Ph.D. in Biological Sciences, I bring a wealth of knowledge and expertise to any project related to the field of biology. With extensive experience in research, data analysis, and technical writing, I am well-equipped to tackle a variety of projects, including scientific manuscripts, grant proposals, and research reports. My expertise spans across multiple disciplines, including molecular biology, genetics, microbiology, and biochemistry. I have experience in designing and conducting experiments, analyzing data using statistical software, and interpreting results to draw meaningful conclusions. Additionally, I have excellent technical writing skills and can communicate complex scientific concepts in a clear and concise manner. I am passionate about staying up-to-date with the latest advancements in biological sciences, and I am always eager to apply my knowledge to new projects. My attention to detail, commitment to quality, and ability to work independently make me an excellent candidate for any project. I Can provide assistance in • Manuscript/Research Paper Writing • Scientific writing • Referencing Management • Systematic Review • Data analysis • Medical Research • Article summaries • Paraphrasing and Proofreading • Meta-Analysis • Medical Writing • Life Science writing • Grant Writing Let's work together to advance our understanding of the world around us.