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Project details
I am a professional research scientist in Biotechnology and AI. I am here to help in solving classic and advanced Machine Learning problems like regression, classification or clustering and deep neural networks. I can create code in various Python Framework like sklearn, keras, tensorflow, pandas, numpy or PyTorch. I assure quality as I've performed more than commercial projects connected with Data Science, Machine learning, NLP and Deep learning.
I have expertise in all domains of Machine learning algorithms like supervised learning, unsupervised learning, reinforcement learning, Semi-supervised learning, machine learning pipeline and much more.
Why me?
• Already have industrial experience
• Easy to work with
• Work submitted on time
• Regular updates
Contact me before booking order
I have expertise in all domains of Machine learning algorithms like supervised learning, unsupervised learning, reinforcement learning, Semi-supervised learning, machine learning pipeline and much more.
Why me?
• Already have industrial experience
• Easy to work with
• Work submitted on time
• Regular updates
Contact me before booking order
Machine Learning Tools
ChatGPT, Keras, NumPy, OpenCV, Python, PyTorch, scikit-learn, TensorFlowWhat's included
| Service Tiers |
Starter
$90
|
Standard
$180
|
Advanced
$300
|
|---|---|---|---|
| Delivery Time | 1 day | 2 days | 3 days |
Number of Revisions | 2 | 2 | 2 |
Number of Model Variations | 1 | 2 | |
Number of Scenarios | 1 | 3 | |
Number of Graphs/Charts | 1 | 2 | |
Model Validation/Testing | - | ||
Model Documentation | |||
Data Source Connectivity | |||
Source Code |
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AS
Anthony S.
Oct 27, 2025
30 minute consultation
genuine feedback provided. Great to work with.
AF
Aloysius F.
Oct 27, 2025
Bioinformatics tutor
Great work- always prompt and helpful
HA
Hamad A.
Oct 20, 2025
Consultation - Knowledge transfer
Working with Mohammad has been a really positive experience. He’s not only skilled in bioinformatics, population genetics, and genomic analysis, but also very patient and easy to communicate with. He takes the time to explain things clearly and always delivers excellent work. I truly appreciate his dedication and the quality of his results.
YZ
Youwei Z.
Sep 15, 2025
Consultation about speeding up local ollama running
MM
Michelle M.
Aug 20, 2025
30 minute consultation
Mohamed was incredibly helpful in guiding me on how to approach using AI with Retrieval-Augmented Generation (RAG). He gave me clear and practical pointers that made the concept much easier to understand and apply. His explanations were thoughtful, well-structured, and tailored to my needs, which really boosted my confidence in exploring AI with RAG. I truly appreciate his expertise and the time he took to walk me through it!
About Mohammad Waqas
Bioinformatics Expert | RNA-seq, DEG, GEO/TCGA, Pathway Analysis
100%
Job Success
Chakwal, Pakistan - 3:17 am local time
You send the raw data, count matrix, or accession ID and I deliver clean analysis, reproducible code, visualizations, and a biological interpretation report.
As a Genomics & Bioinformatics Expert, I help researchers, labs, biotech teams, and genomics-focused organizations transform complex genomics and sequencing data into differential expression, pathway analysis, variant calling insights, genomic interpretation, population genomics analysis, biomarker discovery, dashboards for biological data visualization, and end-to-end genomics workflows for research, diagnostics, and precision medicine applications. As a Genomics & bioinformatics programmer, computational genomics specialist, and machine learning engineer, I build scalable genomics pipelines and sequencing analysis workflows for RNA-seq, scRNA-seq, NGS, WGS, WES, GWAS, transcriptomics, and multi-omics data using Python, R, Bash, Nextflow, and Snakemake. With 5+ years of experience, I develop reproducible genomics workflows with Docker-based deployment and scalable computational pipelines for genomics research, biomedical data analysis, and large-scale sequencing projects. In Genomics, I specialize in RNA-seq, scRNA-seq, NGS, WGS, WES, transcriptomics, population genomics, GWAS, differential expression, pathway analysis, and multi-omics analysis, transforming raw sequencing data into actionable biological insights for publications, clinical research, and genomics-driven product development.
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MY EXPERTISE INCLUDE
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* End-to-end bioinformatics pipelines, data science pipelines, and machine learning pipelines with Python, R, Bash, Nextflow, and Snakemake
* Docker-based deployment, containerization, and production-ready workflow development
* RNA-seq and scRNA-seq analysis: QC, alignment, normalization, differential expression (DESeq2, edgeR, Seurat)
* NGS data analysis: WGS/WES variant calling, annotation, and genomic interpretation (GATK, Samtools, Bedtools)
* Genomic / Gene Expression Anlaysis
* Primer and probe design for PCR/qPCR assays, including in silico validation, Tm and GC optimization, hairpin/dimer analysis, and BLAST specificity checks
* Machine learning and AI on omics data: predictive modeling, classification, clustering, biomarker discovery
* Multi-omics integration: transcriptomics, proteomics, metabolomics
* Population genetics, GWAS, and statistical genetics analysis
* Structural bioinformatics, protein-ligand docking, and pathway analysis
* Biostatistics: f-statistics, qpAdm, qpWave, phylogenetics
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TOOLS AND TECHNOLOGIES
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Python, R, scikit-learn, TensorFlow, PyTorch, LLM frameworks, vector databases, Nextflow, Snakemake, Docker, GATK, Seurat, Samtools, Bedtools, IGV, Cytoscape, PyMOL, Primer3, IDT OligoAnalyzer, NCBI BLAST
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I help clients transform complex biological and biomedical data into reproducible, scalable, and actionable result, combining bioinformatics, data science, and AI/ML to accelerate research, support publications, and deliver deployable solutions.
If your project involves RNA-seq, NGS, scRNA-seq, multi-omics, machine learning on omics data, I can deliver end-to-end solutions from data processing to deployable outputs.
Let’s discuss your project.
Steps for completing your project
After purchasing the project, send requirements so Mohammad Waqas can start the project.
Delivery time starts when Mohammad Waqas receives requirements from you.
Mohammad Waqas works on your project following the steps below.
Revisions may occur after the delivery date.
It will be fully according to the client's needs.