You will get your data extracted, processed and delivered in the format you want
Project details
Services:
I will extract data from any of the following format: XML, JSON, HTML, CSV, TXT, Excel, PDF, SQL and possibly other on requests, process the data as needed and export it in your format(s) of choice.
My services are backed up by:
• 6+ years of experience in dealing with data in academic settings and professional settings.
• 10+ big data projects involving data from various sectors such as finances, marketing and healthcare.
• A PhD degree in bioinformatics
Why should you hire me?
Delivers in a professional & timely fashion
100% satisfaction
Complete confidentiality
Fluent in English
I will extract data from any of the following format: XML, JSON, HTML, CSV, TXT, Excel, PDF, SQL and possibly other on requests, process the data as needed and export it in your format(s) of choice.
My services are backed up by:
• 6+ years of experience in dealing with data in academic settings and professional settings.
• 10+ big data projects involving data from various sectors such as finances, marketing and healthcare.
• A PhD degree in bioinformatics
Why should you hire me?
Delivers in a professional & timely fashion
100% satisfaction
Complete confidentiality
Fluent in English
Data Tool
PythonWhat's included
| Service Tiers |
Starter
$50
|
Standard
$100
|
Advanced
$150
|
|---|---|---|---|
| Delivery Time | 1 day | 1 day | 1 day |
Number of Revisions | 1 | 2 | 3 |
Number of Pages Mined/Scraped | 1 | 2 | 3 |
Number of Sources Mined/Scraped | 1 | 2 | 3 |
About Jean-Marc
Bioinformatics Specialist, Data Scientist & Platform Engineer - PhD
Oslo, Norway - 9:19 pm local time
PhD in Bioinformatics with a robust foundation in designing and optimizing data pipelines, ETL processes, and integrating large-scale biological datasets. Over 6 years of professional experience in developing end-to-end data processing workflows, building and deploying scalable machine learning models, and implementing statistical models. Proficient in architecting and automating data platforms, ensuring efficient data flow and real-time processing for high-throughput genomics, proteomics, and other omics data. Expertise in creating full-stack solutions that transform complex biological research into actionable insights, leveraging advanced data transformation, analysis, and visualization techniques. Skilled in bridging the gap between bioinformatics and software development, delivering scalable, reliable, and maintainable data solutions.
Technical Skills:
• Programming Languages: Python (7+ years)
• Data Processing: Pandas, Numpy, and other Python-based data manipulation tools
• Databases: SQL (PostgreSQL, MySQL), NoSQL (MongoDB), Vector (Milvus)
• Data Pipelines: ETL processes, Snakemake
• Machine Learning: PyTorch, Scikit-learn, model deployment
• Data Visualization: Matplotlib, Seaborn, Plotly, interactive dashboards
Bioinformatics Tools:
• Programming Libraries: BioPython
• Genetic and Variant Analysis: PLINK, GATK (Genome Analysis Toolkit), variant calling
• Sequence Alignment: MUSCLE
• Genomic Studies: GWAS tools
Molecular Modeling Tools:
• Molecular Dynamics: AMBER, GROMACS
• Structural Visualization: PyMOL
• Docking: AutoDock, VINA, DiffDock, etc.
• Protein Structure Prediction: AlphaFold
• Applications: Molecular dynamics simulations, structural bioinformatics
Extensive experience integrating a wide range of bioinformatics databases across various domains into pipelines and custom software:
Genomic Databases, e.g, NCBI (GenBank, RefSeq), Ensembl, ClinVar
• Protein and Structural Databases, e.g. UniProt, PDB, InterPro, Pfam
• Pathway and Functional Databases, e.g. KEGG
• Chemical and Drug Databases, e.g., ZINC, PubChem, ChemDB, DrugBank
Steps for completing your project
After purchasing the project, send requirements so Jean-Marc can start the project.
Delivery time starts when Jean-Marc receives requirements from you.
Jean-Marc works on your project following the steps below.
Revisions may occur after the delivery date.
Extract data
Data is extracted from the source: website, file, database, etc.
Process data
Data is processed, transformed, cleaned, according to your needs.